BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035F05SP1|AL430086
(943 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1759 1812 0.0
>3x_Contig1759
Length = 25622
Score = 1812 bits (912), Expect = 0.0
Identities = 931/936 (99%), Gaps = 2/936 (0%)
Strand = Plus / Plus
Query: 1 gatccttccgatcgacaaaaacaaacaatcgttctatccttctaaatctgtagtccgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gatccttccgatcgacaaaaacaaacaatcgttctatccttctaaatctgtagtccgttt 335
Query: 61 ggtaaaaaaatctacataaactagataatcttgaagtcttgttttttatataagagaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ggtaaaaaaatctacataaactagataatcttgaagtcttgttttttatataagagaaat 395
Query: 121 tttgtaaaaccgaaaaactgaaaaaaatattcaaaaaaaaaaaaaaactgattaaagttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 tttgtaaaaccgaaaaactgaaaaaaatattcaaaaaaaaaaaaaaactgattaaagttc 455
Query: 181 gtttttaccgtcatatatggtattgaaaactgctcctaatctatatgatcttgttcttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gtttttaccgtcatatatggtattgaaaactgctcctaatctatatgatcttgttcttgc 515
Query: 241 caaatcactttttcttgtaaacagaggtaacaaagtcatcaattctttgtcttaagcgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 caaatcactttttcttgtaaacagaggtaacaaagtcatcaattctttgtcttaagcgct 575
Query: 301 acacttgcataaggtgcctttaactagcattctgatagttaaatgtaccagtgttttgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 acacttgcataaggtgcctttaactagcattctgatagttaaatgtaccagtgttttgac 635
Query: 361 cggaaggcttttttagggcttaaatgtaagctatatggggtcgaattgctcgaagtgtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 cggaaggcttttttagggcttaaatgtaagctatatggggtcgaattgctcgaagtgtca 695
Query: 421 ctccggattttctatcagagtgatttttgaaattcgtctttttttttttccagttaaatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 ctccggattttctatcagagtgatttttgaaattcgtctttttttttttccagttaaatg 755
Query: 481 atgacaagatgcaggaaaaaaaatataggcagacgctaattgatgcttacgagatattca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 atgacaagatgcaggaaaaaaaatataggcagacgctaattgatgcttacgagatattca 815
Query: 541 ttgaccctcactgcttgactattacctgtaccgtttaaacgaataagaacggatattaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 ttgaccctcactgcttgactattacctgtaccgtttaaacgaataagaacggatattaca 875
Query: 601 aggaacacctagatattagacaggtggagtcttgttttagtgtaattctaggtgtgctgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 aggaacacctagatattagacaggtggagtcttgttttagtgtaattctaggtgtgctgt 935
Query: 661 acagccgtttgtaccatcttccttttttgtgtatggtttcccaattatgacttgtttttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 acagccgtttgtaccatcttccttttttgtgtatggtttcccaattatgacttgtttttc 995
Query: 721 aaatctgcgtwatttacgttcacgccgaactccggcacgccggggtaatattgtggtgtg 780
|||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 996 aaatctgcgtaatttacgttcacgccgaactccggcacggcggggtaatattgtggtgtg 1055
Query: 781 tgggtgtggtggggtaagtttactcgtaggggtttttccgtggtttgcaaactcctatat 840
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1056 tgggtgtggtggggtaagtttactcgtaggggtttttccgtgg-ttgcaaactcctatat 1114
Query: 841 tatcatcaatatatcaarcatatgctttggatacgactattcaataattagtt-aaatct 899
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1115 tatcatcaatatatcaagcatatgctttggatacgactattcaataattagttaaaatct 1174
Query: 900 gtgagtgtgatgggcagtggtagagttggtgacaga 935
||||||||||||||||||||||||||||||||||||
Sbjct: 1175 gtgagtgtgatgggcagtggtagagttggtgacaga 1210
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 22,268
Number of Sequences: 1807
Number of extensions: 22268
Number of successful extensions: 2279
Number of sequences better than 1.0e-20: 1
length of query: 943
length of database: 10,358,551
effective HSP length: 16
effective length of query: 927
effective length of database: 10,329,639
effective search space: 9575575353
effective search space used: 9575575353
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)